Software

CARD

A spatially informed deconvolution method for spatially resolved transcriptomics

IRIS

Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics

TableMage

Tool-wielding language model-based agent offers conversational exploration of clinical tabular data.

iDEA

A Bayesian Hierarchical model for integrative Differential expression and gene set Enrichment Analysis using summary statistics for scRNA-seq studies

spMOCA

Accurate and efficient integrative reference-informed spatial domain detection for spatial transcriptomics.